Publications

0000-0001-6920-0041

Gillian P. McHugo, James A. Ward, Said Ismael Ng’ang’a, Laurent A.F. Frantz, Michael Salter-Townshend, Emmeline W. Hill, Grace M. O'Gorman, Kieran G. Meade, Thomas J. Hall, David E. MacHugh (2024). Genome-wide local ancestry and the functional consequences of admixture in African and European cattle populations. Research Square.

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Gillian P. McHugo (2024). Code for Integrative genomics of trypanotolerant and trypanosusceptible hybrid African cattle using genomic and transcriptomic data. Zenodo.

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Gillian P. McHugo (2024). Code for Genome-wide local ancestry and the functional consequences of admixture in African and European cattle populations. Zenodo.

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Gillian P. McHugo (2024). Code for Functional genomics of trypanotolerant and trypanosusceptible cattle infected with 𝘛𝘳𝘺𝘱𝘢𝘯𝘰𝘴𝘰𝘮𝘢 𝘤𝘰𝘯𝘨𝘰𝘭𝘦𝘯𝘴𝘦 across multiple time points and tissues. Zenodo.

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Gillian P. McHugo (2024). Supplementary material for Integrative population and functional genomics of African cattle. Zenodo.

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Gillian P. McHugo, James A. Ward, Said Ismael Ng’ang’a, Laurent A.F. Frantz, Michael Salter-Townshend, Emmeline W. Hill, Grace M. O'Gorman, Kieran G. Meade, Thomas J. Hall, David E. MacHugh (2024). Genome-wide local ancestry and the functional consequences of admixture in African and European cattle populations. bioRxiv, 2024.06.20.599852.

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Thomas J. Hall, Gillian P. McHugo, Michael P. Mullen, James A. Ward, Kate E. Killick, John A. Browne, Stephen V. Gordon, David E. MacHugh (2024). Integrative and comparative genomic analyses of mammalian macrophage responses to intracellular mycobacterial pathogens. Tuberculosis, 147, 102453.

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Pamela A. Kelly, Gillian P. McHugo, Caitriona Scaife, Susan Peters, M. Lynn Stevenson, Jennifer S. McKay, David E. MacHugh, Irene Lara-Saez, Rory Breathnach (2024). Unveiling the role of endoplasmic reticulum stress pathways in canine demodicosis. Parasite Immunology, 46(4), e13033.

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James A. Ward, Said I. Ng’ang’a, Imtiaz A. S. Randhawa, Gillian P. McHugo, John F. O'Grady, Julio M. Flórez, John A. Browne, Ana M. Pérez O'Brien, Antonio J. Landaeta-Hernández, José F. Garcia, Tad S. Sonstegard, Laurent A. F. Frantz, Michael Salter-Townshend, David E. MacHugh (2024). Genomic insights into the population history and adaptive traits of Latin American Criollo cattle. Royal Society Open Science, 11(3), 231388.

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James A. Ward, Said I. Ng’ang’a, Imtiaz A.S. Randhawa, Gillian P. McHugo, John F. O'Grady, Julio M. Flórez, John A. Browne, Ana M. Pérez O'Brien, Antonio J. Landaeta-Hernández, José F. Garcia, Tad S. Sonstegard, Laurent A.F. Frantz, Michael Salter-Townshend, David MacHugh (2024). Ward_𝘦𝘵_𝘢𝘭.(2023)_Table_S8 from Genomic insights into the population history and adaptive traits of Latin American Criollo cattle. Royal Society Open Science.

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James A. Ward, Said I. Ng’ang’a, Imtiaz A.S. Randhawa, Gillian P. McHugo, John F. O'Grady, Julio M. Flórez, John A. Browne, Ana M. Pérez O'Brien, Antonio J. Landaeta-Hernández, José F. Garcia, Tad S. Sonstegard, Laurent A.F. Frantz, Michael Salter-Townshend, David MacHugh (2024). Ward_𝘦𝘵_𝘢𝘭.(2023)_Table_S3 from Genomic insights into the population history and adaptive traits of Latin American Criollo cattle. Royal Society Open Science.

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James A. Ward, Said I. Ng’ang’a, Imtiaz A.S. Randhawa, Gillian P. McHugo, John F. O'Grady, Julio M. Flórez, John A. Browne, Ana M. Pérez O'Brien, Antonio J. Landaeta-Hernández, José F. Garcia, Tad S. Sonstegard, Laurent A.F. Frantz, Michael Salter-Townshend, David MacHugh (2024). Ward_𝘦𝘵_𝘢𝘭.(2023)_Table_S2 from Genomic insights into the population history and adaptive traits of Latin American Criollo cattle. Royal Society Open Science.

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James A. Ward, Said I. Ng’ang’a, Imtiaz A.S. Randhawa, Gillian P. McHugo, John F. O'Grady, Julio M. Flórez, John A. Browne, Ana M. Pérez O'Brien, Antonio J. Landaeta-Hernández, José F. Garcia, Tad S. Sonstegard, Laurent A.F. Frantz, Michael Salter-Townshend, David MacHugh (2024). Ward_𝘦𝘵_𝘢𝘭.(2023)_Supp_Mat_REVISION from Genomic insights into the population history and adaptive traits of Latin American Criollo cattle. Royal Society Open Science.

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James A. Ward, Said I. Ng’ang’a, Imtiaz A. S. Randhawa, Gillian P. McHugo, John F. O'Grady, Julio M. Flórez, John A. Browne, Ana M. Pérez O'Brien, Antonio J. Landaeta-Hernández, José F. Garcia, Tad S. Sonstegard, Laurent A. F. Frantz, Michael Salter-Townshend, David E. MacHugh (2024). Supplementary material from Genomic insights into the population history and adaptive traits of Latin American Criollo cattle. Collection. Figshare.

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John F. O'Grady, Gillian P. McHugo, James A. Ward, Thomas J. Hall, Sarah L. Faherty O'Donnell, Carolina N. Correia, John A. Browne, Michael McDonald, Eamonn Gormley, Valentina Riggio, James G. D. Prendergast, Emily L. Clark, Hubert Pausch, Kieran G. Meade, Isobel C. Gormley, Stephen V. Gordon, David E. MacHugh (2024). Integrative genomics sheds light on the immunobiology of tuberculosis in cattle. bioRxiv, 2024.02.27.582295.

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John Francis O'Grady, Gillian P. McHugo, James A. Ward, Thomas J. Hall, Sarah L. Faherty O'Donnell, Carolina N. Correia, John A. Browne, Michael McDonald, Eamonn Gormley, Valentina Riggio, James G. D. Prendergast, Emily L. Clark, Hubert Pausch, Kieran G. Meade, Isobel C. Gormley, Stephen V. Gordon, David E. MacHugh (2024). Integrative genomics sheds light on the immunobiology of tuberculosis in cattle. Zenodo.

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John Francis O'Grady, Gillian P. McHugo, James A. Ward, Thomas J. Hall, Sarah L. Faherty O'Donnell, Carolina N. Correia, John A. Browne, Michael McDonald, Eamonn Gormley, Valentina Riggio, James G. D. Prendergast, Emily L. Clark, Hubert Pausch, Kieran G. Meade, Isobel C. Gormley, Stephen V. Gordon, David E. MacHugh (2024). Integrative genomics sheds light on the immunobiology of tuberculosis in cattle. Gene Expression Omnibus.

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James A. Ward, Said I. Ng’ang’a, Imtiaz A. S. Randhawa, Gillian P. McHugo, John F. O'Grady, Julio M. Flórez, John A. Browne, Ana M. Pérez O'Brien, Antonio J. Landaeta-Hernández, José F. Garcia, Tad S. Sonstegard, Laurent A. F. Frantz, Michael Salter-Townshend, David E. MacHugh (2023). Population genetics of Latin American Criollo cattle. European Nucleotide Archive.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). Preferential differential gene expression within the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴. Frontiers in Immunology, 14, 1265038.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). DataSheet_6_Preferential differential gene expression within the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴.xlsx. Frontiers in Immunology.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). DataSheet_5_Preferential differential gene expression within the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴.xlsx. Frontiers in Immunology.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). DataSheet_4_Preferential differential gene expression within the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴.xlsx. Frontiers in Immunology.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). DataSheet_3_Preferential differential gene expression within the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴.xlsx. Frontiers in Immunology.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). DataSheet_2_Preferential differential gene expression within the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴.xlsx.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). DataSheet_1_Preferential differential gene expression within the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴.xlsx. Frontiers in Immunology.

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James A. Ward, Said I. Ng’ang’a, Imtiaz A.S. Randhawa, Gillian P. McHugo, John F O'Grady, Julio M. Flórez, John A. Browne, Ana M. Pérez O'Brien, Antonio J. Landaeta-Hernández, José F. Garcia, Tad S. Sonstegard, Laurent A.F. Frantz, Michael Salter-Townshend, David E. MacHugh (2023). Genomic insights into the population history and adaptive traits of Latin American Criollo cattle. bioRxiv, 2023.09.10.556512.

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Pamela A. Kelly, Gillian P. McHugo, Caitriona Scaife, Susan Peters, M. Lynn Stevenson, Jennifer S. McKay, David E. MacHugh, Irene Lara-Saez, Rory Breathnach (2023). Unveiling the role of endoplasmic reticulum stress pathways in canine demodicosis. bioRxiv, 2023.08.11.552979.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). Preferential differential gene expression within the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴. bioRxiv, 2023.07.21.550071.

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Thomas J. Hall, Gillian P. McHugo, Michael P. Mullen, James A. Ward, Kate E. Killick, John A. Browne, Stephen V. Gordon, David E. MacHugh (2023). Integrative and comparative genomic analyses of mammalian macrophage responses to intracellular mycobacterial pathogens. bioRxiv, 2023.07.14.549042.

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Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, Kieran G. Meade (2023). Preferential differential gene expression in the WC1.1⁺ γδ T cell compartment in cattle naturally infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴. BioStudies.

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Carolina N. Correia, Gillian P. McHugo, John A. Browne, Kirsten E. McLoughlin, Nicolas C. Nalpas, David A. Magee, Adam O. Whelan, Bernardo Villarreal-Ramos, H. Martin Vordermeier, Eamonn Gormley, Stephen V. Gordon, David E. MacHugh (2022). RNA-seq transcriptional profile of PPD-b stimulated peripheral blood from cattle infected with 𝘔. 𝘣𝘰𝘷𝘪𝘴 across an experimental time course. European Nucleotide Archive.

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Carolina N. Correia, Gillian P. McHugo, John A. Browne, Kirsten E. McLoughlin, Nicolas C. Nalpas, David A. Magee, Adam O. Whelan, Bernardo Villarreal-Ramos, H. Martin Vordermeier, Eamonn Gormley, Stephen V. Gordon, David E. MacHugh (2022). High-resolution transcriptomics of bovine purified protein derivative-stimulated peripheral blood from cattle infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴 across an experimental time course. Tuberculosis, 136, 102235.

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James A. Ward, Gillian P. McHugo, Michael J. Dover, Thomas J. Hall, Said Ismael Ng’ang’a, Tad S. Sonstegard, Daniel G. Bradley, Laurent A.F. Frantz, Michael Salter-Townshend, David E. MacHugh (2022). Genome-wide local ancestry and evidence for mitonuclear co-adaptation in African hybrid cattle populations (𝘉𝘰𝘴 𝘵𝘢𝘶𝘳𝘶𝘴/𝘪𝘯𝘥𝘪𝘤𝘶𝘴). Ward 𝘦𝘵 𝘢𝘭. 2022. Mendeley Data.

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James A. Ward, Gillian P. McHugo, Michael J. Dover, Thomas J. Hall, Said Ismael Ng’ang’a, Tad S. Sonstegard, Daniel G. Bradley, Laurent A.F. Frantz, Michael Salter-Townshend, David E. MacHugh (2022). Genome-wide local ancestry and evidence for mitonuclear coadaptation in African hybrid cattle populations. iScience, 25(7), 104672.

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Carolina N. Correia, Gillian P. McHugo, John A. Browne, Kirsten E. McLoughlin, Nicolas C. Nalpas, David A. Magee, Adam O. Whelan, Bernardo Villarreal-Ramos, H. Martin Vordermeier, Eamonn Gormley, Stephen V. Gordon, David E. MacHugh (2022). High-resolution transcriptomics of bovine purified protein derivative-stimulated peripheral blood from cattle infected with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴 across an experimental time course. bioRxiv, 2022.04.19.488769.

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James A. Ward, Gillian P. McHugo, Michael J. Dover, Thomas J. Hall, Said Ismael Ng’ang’a, Tad S. Sonstegard, Daniel G. Bradley, Laurent A.F. Frantz, Michael Salter-Townshend, David E. MacHugh (2022). Genome-wide local ancestry and direct evidence for mitonuclear coadaptation in African hybrid cattle populations (𝘉𝘰𝘴 𝘵𝘢𝘶𝘳𝘶𝘴/𝘪𝘯𝘥𝘪𝘤𝘶𝘴). SSRN.

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James A. Ward, Gillian P. McHugo, Michael J. Dover, Thomas J. Hall, Said Ismael Ng’ang’a, Tad S. Sonstegard, Daniel G. Bradley, Laurent A.F. Frantz, Michael Salter-Townshend, David E. MacHugh (2021). Genome-wide local ancestry and direct evidence for mitonuclear co-adaptation in African hybrid cattle populations (𝘉𝘰𝘴 𝘵𝘢𝘶𝘳𝘶𝘴/𝘪𝘯𝘥𝘪𝘤𝘶𝘴). bioRxiv, 2021.08.26.457829.

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Michael J. Dover, Thomas J. Hall, Gillian P. McHugo, David E. MacHugh (2021). A functional and integrative genomics analysis of host response to disease caused by infection with 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘵𝘶𝘣𝘦𝘳𝘤𝘶𝘭𝘰𝘴𝘪𝘴 in humans and 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴 in cattle. 2020 UCD School of Medicine Summer Student Research Awards. Irish Journal of Medical Science, 190(Supplement 4), S135–S136.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. Collection. Figshare.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Additional file 8 of Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Additional file 7 of Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Additional file 6 of Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Additional file 5 of Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Additional file 4 of Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Additional file 3 of Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Additional file 2 of Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Additional file 1 of Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. BMC Genomics, 22, 343.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Donagh P. Berry, Siobhán C. Ring, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2021). Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria: RNA-seq statistics and results. Dryad.

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Maria Saura, Francesca Bertolini, Christos Palaiokostas (Eds) (2020). Genetic variability in conservation and selection programs in the post-genomics era. Research Topic. Frontiers.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2020). Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria. Research Square.

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Thomas J. Hall, Michael P. Mullen, Gillian P. McHugo, Kate E. Killick, Siobhán C. Ring, Donagh P. Berry, Carolina N. Correia, John A. Browne, Stephen V. Gordon, David E. MacHugh (2020). Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria.

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Gillian P. McHugo, Michael J. Dover, David E. MacHugh (2019). Unlocking the origins and biology of domestic animals using ancient DNA and paleogenomics. BMC Biology, 17, 98.

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Gillian P. McHugo, Sam Browett, Imtiaz A. S. Randhawa, Dawn J. Howard, Michael P. Mullen, Ian W. Richardson, Stephen D. E. Park, David A. Magee, Erik Scraggs, Michael J. Dover, Carolina N. Correia, James P. Hanrahan, David E. MacHugh (2019). A population genomics analysis of the native Irish Galway sheep breed: Table_1.docx. Frontiers in Genetics.

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Gillian P. McHugo, Sam Browett, Imtiaz A. S. Randhawa, Dawn J. Howard, Michael P. Mullen, Ian W. Richardson, Stephen D. E. Park, David A. Magee, Erik Scraggs, Michael J. Dover, Carolina N. Correia, James P. Hanrahan, David E. MacHugh (2019). A population genomics analysis of the native Irish Galway sheep breed. Frontiers in Genetics, 10, 927.

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Thomas J. Hall, Michael P. Mullen, Kate E. Killick, Gillian P. McHugo, John A. Browne, Carolina N. Correia, Stephen V. Gordon, David E. MacHugh (2019). Integrative genomics of the host response to 𝘔𝘺𝘤𝘰𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘣𝘰𝘷𝘪𝘴 in bovine alveolar macrophages. 37th International Society for Animal Genetics Conference. ResearchGate.

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Gillian P. McHugo, Sam Browett, Imtiaz A. S. Randhawa, Dawn J. Howard, Michael P. Mullen, Ian W. Richardson, Stephen D. E. Park, David A. Magee, Erik Scraggs, Michael Dover, Carolina N. Correia, James P. Hanrahan, David E. MacHugh (2019). A population genomics analysis of the native Irish Galway sheep breed. bioRxiv, 645754.

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Gillian P. McHugo, Grace M. O'Gorman, Emmeline W. Hill, David E. MacHugh (2019). Local ancestry and functional genomics of trypanotolerant and trypanosusceptible admixed African cattle breeds. 47th European Mathematical Genetics Meeting. Human Heredity, 83(5), 250.

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Sam Browett, Gillian McHugo, Ian W. Richardson, David A. Magee, Stephen D. E. Park, Alan G. Fahey, John F. Kearney, Carolina N. Correia, Imtiaz A.S. Randhawa, David E. MacHugh (2019). Data from: Genomic characterisation of the indigenous Irish Kerry cattle breed. Dryad.

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Sam Browett, Gillian McHugo, Ian W. Richardson, David A. Magee, Stephen D. E. Park, Alan G. Fahey, John F. Kearney, Carolina N. Correia, Imtiaz A. S. Randhawa, David E. MacHugh (2018). Genomic characterisation of the indigenous Irish Kerry cattle breed: Table6.xlsx. Frontiers in Genetics.

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Sam Browett, Gillian McHugo, Ian W. Richardson, David A. Magee, Stephen D. E. Park, Alan G. Fahey, John F. Kearney, Carolina N. Correia, Imtiaz A. S. Randhawa, David E. MacHugh (2018). Genomic characterisation of the indigenous Irish Kerry cattle breed: Table1.xlsx. Frontiers in Genetics.

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Sam Browett, Gillian McHugo, Ian W. Richardson, David A. Magee, Stephen D. E. Park, Alan G. Fahey, John F. Kearney, Carolina N. Correia, Imtiaz A. S. Randhawa, David E. MacHugh (2018). Genomic characterisation of the indigenous Irish Kerry cattle breed: DataSheet1.pdf. Frontiers in Genetics.

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Sam Browett, Gillian McHugo, Ian W. Richardson, David A. Magee, Stephen D. E. Park, Alan G. Fahey, John F. Kearney, Carolina N. Correia, Imtiaz A. S. Randhawa, David E. MacHugh (2018). Genomic characterisation of the indigenous Irish Kerry cattle breed. Frontiers in Genetics, 9, 51.

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Sam Browett, Gillian McHugo, Ian W. Richardson, David A. Magee, Stephen D. E. Park, Alan G. Fahey, John F. Kearney, Carolina N. Correia, Imtiaz A. S. Randhawa, David E. MacHugh (2017). Genomic characterisation and conservation genetics of the indigenous Irish Kerry cattle breed. bioRxiv, 210229.

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